Awesome Knowledge Graphs
Knowledge Graphs is one of the most active areas in Awesome Graph Learning β 938 papers in this collection, evaluated on datasets like WN-18RR, FB-15k-237, DBLP. A strong starting point is "Graph Neural Networks in Modern AI-aided Drug Discovery".
Datasets & benchmarks
Key papers
- Graph Neural Networks in Modern AI-aided Drug Discovery (2025)Odin Zhang et al.8.75
- Applications of Large Models in Medicine (2025)YunHe Su et al.7.19
- Graph Neural Networks for Knowledge Enhanced Visual Representation of Paintings (2021)Athanasios Efthymiou et al.6.39
- Generalizing Graph Foundation Models via Hyperbolic Retrieval-Augmented Generation (2026)Yifan Jin et al.4.39
- ERAlign: Energy-based Representation Alignment of GNNs and LLMs on Text-attributed Graphs (2026)Xianlin Zeng et al.4.39
- LLMs+Graphs: Toward Graph-Native, Synergistic AI Systems (2026)Arijit Khan et al.4.39
- GOProteinGNN: Leveraging Protein Knowledge Graphs for Protein
Representation Learning (2024)Dan Kalifa et al.4.36
- Instance Discrimination for Link Prediction (2026)Valentin Cuzin-Rambaud (SyCoSMA et al.4.33
- Is Fixing Schema Graphs Necessary? Full-Resolution Graph Structure Learning for Relational Deep Learning (2026)Yi Huang et al.4.33
- Graph Alignment Topology as an Inductive Bias for Grounding Detection (2026)Paul Landes et al.4.33
- Scalable Heterogeneous Graph Foundation Models for Data-Driven Optimal Power Flow in Smart Grids (2026)Massimiliano Lupo Pasini et al.4.33
- Fuzzy, Neutrosophic, and Uncertain Graph Theory: Properties and Applications (2026)Takaaki Fujita et al.4.33
- Incorporating Deep Learning Design in Database Queries (2026)Yuval Lev Lubarsky et al.4.33
- Advancing Graph Few-Shot Learning via In-Context Learning (2026)Renchu Guan et al.4.33
- Clustering as Reasoning: A $k$-Means Interpretation of Chain-of-Thought Graph Learning (2026)Xuanting Xie et al.4.33
- Capture-Calibrate-Coach: A Graph-Based Framework for Knowledge Monitoring Estimation and Adaptive Feedback (2026)Gen Li et al.4.33
- L2IR: Revealing Latent Intent in Graph Fraud Detection (2026)Jinsheng Guo et al.4.33
- TED: Related Party Transaction guided Tax Evasion Detection on Heterogeneous Graph (2026)Yiming Xu et al.4.33
- Let Relations Speak: An End-to-End LLM-GNN Soft Prompt Framework for Fraud Detection (2026)Zhixing Zuo et al.4.33
- SemStruct: Contextualizing Semantic Embeddings with Structural Information for Schema Matching (2026)Inwon Kang et al.4.33
- UniGraph2: Learning a Unified Embedding Space to Bind Multimodal Graphs (2025)Yufei He et al.4.30
- A knowledge extrapolation model for attack inference based on graph attention networks and relation mapping (2026)Weiwu Ren et al.4.26
- Predicting Student Success with Heterogeneous Graph Deep Learning and Machine Learning Models (2026)Anca Muresan et al.3.98
- Bridging Cognitive Neuroscience and Graph Intelligence: Hippocampus-Inspired Multi-View Hypergraph Learning for Web Finance Fraud (2026)Rongkun Cui et al.3.98
- Relational Deep Learning: Challenges, Foundations and Next-Generation Architectures (2025)Vijay Prakash Dwivedi et al.3.86
- Recent Advances in Malware Detection: Graph Learning and Explainability (2025)Hossein Shokouhinejad et al.3.64
- FedAGHN: Personalized Federated Learning with Attentive Graph HyperNetworks (2025)Jiarui Song et al.3.59
- GOAL: Graph-based Objective-Aligned Diffusion Solvers for Dynamic Multi-Objective Optimization (2026)Xingyu Li3.45
- DeTox-Fed: Detecting Toxic Conversations in the Fediverse with Federated Graph Neural Networks (2026)Pantelitsa Leonidou et al.3.45
- Causal Graph Neural Networks for Healthcare (2025)Munib Mesinovic et al.3.21
- HGEN: Heterogeneous Graph Ensemble Networks (2025)Jiajun Shen et al.3.10
- HypoChainer: A Collaborative System Combining LLMs and Knowledge Graphs for Hypothesis-Driven Scientific Discovery (2025)Haoran Jiang et al.2.99
- Manifold GCN: Diffusion-based Convolutional Neural Network for
Manifold-valued Graphs (2024)Martin Hanik and Gabriele Steidl and Christoph von Tycowicz2.92
- Attention Mechanisms Perspective: Exploring LLM Processing of
Graph-Structured Data (2025)Zhong Guan et al.2.87
- Adaptive Graph Unlearning (2025)Pengfei Ding et al.2.87
- Evidence-Grounded Multimodal Misinformation Detection with Attention-Based GNNs (2025)Sharad Duwal et al.2.87
- GraphPINE: Graph Importance Propagation for Interpretable Drug Response
Prediction (2025)Yoshitaka Inoue et al.2.82
- LLM-Empowered Class Imbalanced Graph Prompt Learning for Online Drug
Trafficking Detection (2025)Tianyi Ma et al.2.76
- EdgeGFL: Rethinking Edge Information in Graph Feature Preference
Learning (2025)Shengda Zhuo et al.2.71
- Trustworthy GNNs with LLMs: A Systematic Review and Taxonomy (2025)Ruizhan Xue et al.2.71
- Graph in the Vault: Protecting Edge GNN Inference with Trusted Execution
Environment (2025)Ruyi Ding et al.2.71
- GraphDART: Graph Distillation for Efficient Advanced Persistent Threat
Detection (2025)Saba Fathi Rabooki et al.2.65
- GraphICL: Unlocking Graph Learning Potential in LLMs through Structured
Prompt Design (2025)Yuanfu Sun et al.2.65
- Large Language Models Meet Graph Neural Networks for Text-Numeric Graph
Reasoning (2025)Haoran Song et al.2.65
- MissionGNN: Hierarchical Multimodal GNN-based Weakly Supervised Video Anomaly Recognition with Mission-Specific Knowledge Graph Generation (2024)Sanggeon Yun et al.2.26
- TRACE-DDI: A Hybrid Framework of TransformerβGAT Context Encoder and Pathway-Anchored Knowledge Graphs for DDI Prediction (2026)Junku Kim et al.2.00
- Collaborative Path Optimization for Technology-Driven Innovation in the Sports Industry Using Enhanced Graph Attention Networks (2026)Zhaoyin Jiang et al.2.00
- ARN-GAT: an adaptive node and relation modeling framework for patent knowledge graph topic identification (2026)Weizhong Liu et al.2.00
- Ensembles of Graph Attention Networks Supervised by Genotype-to-Phenotype Structures Improved Genomic Prediction Performance (2026)Shunichiro Tomura et al.2.00
- Domain-Adaptive Sparse Graph Attention Network for Neural Resource Recommendation in Business Language Learning (2026)Zhengyan Deng2.00
- GATGrasp: Learning Task-Aware Affordance Grasp for Robotic Tool Usage With Knowledge Graph Attention Mechanism (2026)Xungao Zhong et al.2.00
- Hybrid Graph Attention Network and XGBoost Framework for Interpretable Molecular Toxicity Prediction (2026)S. May et al.2.00
- Graph Neural Network based Hierarchy-Aware Embeddings of Knowledge Graphs: Applications to Yeast Phenotype Prediction (2026)Filip Kronstr\"om et al.1.94
- CHoE: Cross-Domain Heterogeneous Graph Prompt Learning via Structure-Conditioned Experts (2026)Peiyuan Li et al.1.94
- Is One Token All It Takes? Graph Pooling Tokens for LLM-based GraphQA (2026)Ankit Grover et al.1.89
- A Cross-graph Tuning-free GNN Prompting Framework (2026)Yaqi Chen et al.1.89
- Graph Topology Information Enhanced Heterogeneous Graph Representation Learning (2026)He Zhao et al.1.89
- Toward a universal foundation model for graph-structured data (2026)Sakib Mostafa et al.1.89
- GNN-as-Judge: Unleashing the Power of LLMs for Graph Learning with GNN Feedback (2026)Ruiyao Xu et al.1.89
- NOMAD: Generating Embeddings for Massive Distributed Graphs (2026)Aishwarya Sarkar et al.1.89