Abstract
Edit distance is a fundamental measure of distance between strings and has been widely studied in computer science. While the problem of estimating edit distance has been studied extensively, the equally important question of actually producing an alignment (i.e., the sequence of edits) has received far less attention. Somewhat surprisingly, we show that any algorithm to estimate edit distance can be used in a black-box fashion to produce an approximate alignment of strings, with modest loss in approximation factor and small loss in run time. Plugging in the result of Andoni, Krauthgamer, and Onak, we obtain an alignment that is a \((log n)^\{O(1/\epsilon^2)\}\) approximation in time \(\tilde\{O\}(n^\{1 + \epsilon\})\). Closely related to the study of approximation algorithms is the study of metric embeddings for edit distance. We show that min-hash techniques can be useful in designing edit distance embeddings through three results: (1) An embedding from Ulam distance (edit distance