Abstract
We present a multi-timescale Quantum Averaging Theory (QAT), a unitarity-preserving generalized Floquet framework for analytically modeling periodically and almost-periodically driven quantum systems across multiple timescales. By integrating the Magnus expansion with the method of averaging on multiple scales, QAT captures the effects of both far-detuned and near-resonant interactions on system dynamics. The framework yields an effective Hamiltonian description while retaining fast oscillatory effects within a separate dynamical phase operator, ensuring accuracy across a wide range of driving regimes. We demonstrate the rapid convergence of QAT results toward exact numerical solutions in both detuning regimes for touchstone problems in quantum information science.