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• Flux-dependent graphs for metabolic networks
  2016
• Prediction of allosteric sites and mediating interactions through bond-to-bond propensities
  2016
• From Free Text to Clusters of Content in Health Records: An Unsupervised Graph Partitioning Approach
  2018
• Scale-dependent measure of network centrality from diffusion dynamics
  2019
• Graph-based data clustering via multiscale community detection
  2019
• Geometric graphs from data to aid classification tasks with graph convolutional networks
  2020
• A continuous Structural Intervention Distance to compare Causal Graphs
  2023