Reactome

Reactome is a curated database of biological pathways and reactions that provides a comprehensive resource for evaluating the biological organization and functional annotations of features in single-cell foundation models.

Papers using Reactome (2)

Sparse autoencoders reveal organized biological knowledge but minimal regulatory logic in single-cell foundation models: a comparative atlas of Geneformer and scGPT2026Open Biomedical Knowledge Graphs at Scale: Construction, Federation, and AI Agent Access with Samyama Graph Database2026